Grenepipe

A Snakemake pipeline for variant calling from raw sample sequences, with lots of bells and whistles.

Grenedalf

A toolkit for analyzing allele frequencies of pool-sequenced samples, e.g., in Evolve and Resequence experiments.

The mutations-area relationship (MAR)

Repository with reproducible examples

Deepbiosphere

A deep neural network to learn relationship between habitats and plant species using satellite images.

Genomics of rapid Evolution to Novel Environments